Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7422
Gene Symbol: VEGFA
VEGFA
0.100 AlteredExpression disease LHGDN [p53 and vascular endothelial growth factor expression in astrocytoma and their relation to angiogenesis]. 11783119 2001
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.200 Biomarker disease BEFREE Young patients with IDH wild type astrocytomas and glioblastoma had better outcomes than reported historical controls. 31371189 2019
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.200 Biomarker disease BEFREE Young patients with IDH wild type astrocytomas and glioblastoma had better outcomes than reported historical controls. 31371189 2019
Entrez Id: 4852
Gene Symbol: NPY
NPY
0.020 GeneticVariation disease BEFREE World Health Organization Grade IV glioblastomas showed a remarkably high expression of the NPY receptor subtype Y2 with respect to both incidence (83%) and density (mean, 4,886 dpm/mg tissue); astrocytomas World Health Organization Grades I to III and oligodendrogliomas also exhibited high Y2 incidences but low Y2 densities. 18648328 2008
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.200 GeneticVariation disease BEFREE Without exception, all were R132C (CGT-->TGT), which in sporadic astrocytomas accounts for <5% of IDH1 mutations. 19340432 2009
Entrez Id: 25824
Gene Symbol: PRDX5
PRDX5
0.010 Biomarker disease BEFREE Within diffuse astrocytomas only Trx (p = 0.0001) and TrxR (p= 0.04) significantly associated with increased malignancy grade. 12744469 2003
Entrez Id: 3417
Gene Symbol: IDH1
IDH1
0.200 Biomarker disease BEFREE With the advent of molecular genetics, molecular diagnostic testing has been added to histological evaluation in the armamentarium of the pathologist, and the recent World Health Organization (WHO) Classification of Tumors of the Central Nervous System encourages testing for isocitrate dehydrogenase (IDH) gene status in the classification of diffuse astrocytic gliomas. 29548048 2018
Entrez Id: 3418
Gene Symbol: IDH2
IDH2
0.200 Biomarker disease BEFREE With the advent of molecular genetics, molecular diagnostic testing has been added to histological evaluation in the armamentarium of the pathologist, and the recent World Health Organization (WHO) Classification of Tumors of the Central Nervous System encourages testing for isocitrate dehydrogenase (IDH) gene status in the classification of diffuse astrocytic gliomas. 29548048 2018
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 GeneticVariation disease BEFREE With secondary glioblastomas that develop through progression from low-grade astrocytomas, they have in common a younger patient age at manifestation and a high frequency (>70%) of p53 mutations. 10068201 1999
Entrez Id: 10653
Gene Symbol: SPINT2
SPINT2
0.010 AlteredExpression disease BEFREE With RNA blot analysis, HAI-2/PB mRNA was expressed in normal brain and in low-grade astrocytomas, but was hardly detectable in anaplastic astrocytomas and glioblastomas, indicating that its expression levels were inversely correlated with the histological grade of human gliomas. 11433397 2001
Entrez Id: 10215
Gene Symbol: OLIG2
OLIG2
0.070 Biomarker disease BEFREE With dual-labeling, glioblastoma had the highest percentage of OLIG2 expressing cells that were also Ki-67 positive (mean = 16.3%) whereas pilocytic astrocytoma WHO grade I and astrocytoma WHO grade II had the lowest (0.9 and 1%, respectively); most of the Ki-67 positive cells in the diffuse-type astrocytomas (WHO grade II-III) were also OLIG2 positive (92-94%). 21193945 2011
Entrez Id: 7157
Gene Symbol: TP53
TP53
0.400 AlteredExpression disease BEFREE Wip1 over-expression correlated with TP53/p14(ARF) pathway disruption in human astrocytomas. 21695702 2011
Entrez Id: 1116
Gene Symbol: CHI3L1
CHI3L1
0.050 AlteredExpression disease BEFREE WHO grade 1, 2, 3, and 4 primary astrocytomas (210 patients) were evaluated for YKL-40 protein expression status in immunohistochemical analyses. 20499402 2010
Entrez Id: 6962
Gene Symbol: TRBV20OR9-2
TRBV20OR9-2
0.010 Biomarker disease BEFREE Whilst there was no obvious restriction of the AV and BV gene segment usage, complementarity-determining region 3 size analysis and sequencing of amplified TCR transcripts revealed multiple T cell oligoclonal expansions in all astrocytomas analyzed. 10421791 1999
Entrez Id: 60
Gene Symbol: ACTB
ACTB
0.070 AlteredExpression disease BEFREE While B2M and ACTB exhibited comparable levels of expression within different grades of astrocytomas and meningiomas, GAPD showed an inverse pattern in these tumors. 10378372 1999
Entrez Id: 7249
Gene Symbol: TSC2
TSC2
0.180 Biomarker disease BEFREE Whereas Rap1 overexpression was observed in astrocytomas of all malignancy grades, tuberin loss was seen most frequently in the higher-grade astrocytomas. 12469204 2003
Entrez Id: 5079
Gene Symbol: PAX5
PAX5
0.010 AlteredExpression disease BEFREE Whereas murine Pax5 is not expressed in the forebrain at any stage, PAX5 expression was increased in a range of astrocytomas (WHO grades II-IV) which originated in the forebrain. 9815975 1995
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 AlteredExpression disease BEFREE Whereas IL-1beta, tumor necrosis factor-alpha, and transforming growth factor-beta mRNA levels remained unchanged, stimulation of astrocytoma cells (T98G, CB193, U118MG) by C3a, C5a, and peptidic C3aR and C5aR agonists induced an increase in the IL-6 mRNA level. 10349852 1999
Entrez Id: 2670
Gene Symbol: GFAP
GFAP
0.100 Biomarker disease BEFREE When assessed in an in vitro invasion assay system, antisense GFAP-transfected astrocytoma cells more readily penetrated Matrigel-coated filters than did controls. 8205549 1994
Entrez Id: 28984
Gene Symbol: RGCC
RGCC
0.020 Biomarker disease BEFREE Western blot analysis of tumor biopsies further indicated that PY142 and active β-catenin accumulate independently, correlating with the expression of Snail/Slug (an epithelial-mesenchymal transition marker) and Cyclin-D1 (a regulator of cell cycle progression), respectively, in high grade astrocytomas and GBMs. 26654598 2015
Entrez Id: 595
Gene Symbol: CCND1
CCND1
0.090 Biomarker disease BEFREE Western blot analysis of tumor biopsies further indicated that PY142 and active β-catenin accumulate independently, correlating with the expression of Snail/Slug (an epithelial-mesenchymal transition marker) and Cyclin-D1 (a regulator of cell cycle progression), respectively, in high grade astrocytomas and GBMs. 26654598 2015
Entrez Id: 1499
Gene Symbol: CTNNB1
CTNNB1
0.100 AlteredExpression disease BEFREE Western blot analysis of tumor biopsies further indicated that PY142 and active β-catenin accumulate independently, correlating with the expression of Snail/Slug (an epithelial-mesenchymal transition marker) and Cyclin-D1 (a regulator of cell cycle progression), respectively, in high grade astrocytomas and GBMs. 26654598 2015
Entrez Id: 3553
Gene Symbol: IL1B
IL1B
0.100 Biomarker disease BEFREE We, therefore, examined the expression of IL-6, GM-CSF, and TNF-alpha in human primary astrocytes and astrocytoma cell lines U251 and 253 exposed to IL-1 in serum-free medium. 8903854 1995
Entrez Id: 3552
Gene Symbol: IL1A
IL1A
0.070 Biomarker disease BEFREE We, therefore, examined the expression of IL-6, GM-CSF, and TNF-alpha in human primary astrocytes and astrocytoma cell lines U251 and 253 exposed to IL-1 in serum-free medium. 8903854 1995
Entrez Id: 7124
Gene Symbol: TNF
TNF
0.100 Biomarker disease BEFREE We, therefore, examined the expression of IL-6, GM-CSF, and TNF-alpha in human primary astrocytes and astrocytoma cell lines U251 and 253 exposed to IL-1 in serum-free medium. 8903854 1995